STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM160B1Family with sequence similarity 160 member B1. (736 aa)    
Predicted Functional Partners:
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.789
HOOK1
Hook microtubule tethering protein 1.
    
 
 0.784
PALD1
Phosphatase domain containing paladin 1.
      
 0.753
FAM167B
Family with sequence similarity 167 member B.
      
 0.750
AKTIP
AKT interacting protein.
    
 
 0.731
FAM124A
Family with sequence similarity 124 member A.
      
 0.702
FAM160A1
Family with sequence similarity 160 member A1.
    
 
 0.694
TNFSF13B
TNF superfamily member 13b.
    
   0.647
HOOK2
Hook microtubule tethering protein 2.
    
 
 0.529
TRUB1
TruB pseudouridine synthase family member 1.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.