Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GATD1Glutamine amidotransferase like class 1 domain containing 1. (230 aa)    
Predicted Functional Partners:
ENSNVIP00000029678
Protein phosphatase 1 regulatory subunit 21.
    
   0.867
CRYZL1
Crystallin zeta like 1.
   
   0.851
C12orf4
Chromosome 12 open reading frame 4.
    
   0.747
TNNI2
Troponin I2, fast skeletal type.
   
 0.690
TNNI3
Troponin I3, cardiac type.
   
 0.690
ENSNVIP00000015123
annotation not available
   
 0.690
TNNI1
Troponin I1, slow skeletal type.
   
 0.690
RTN4IP1
Reticulon 4 interacting protein 1.
   
   0.633
ENSNVIP00000006334
annotation not available
   
 0.584
ENSNVIP00000015446
annotation not available
   
 0.584
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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