STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCLNNicalin. (563 aa)    
Predicted Functional Partners:
TMEM147
Transmembrane protein 147.
    
 0.975
CCDC47
Coiled-coil domain containing 47.
    
 0.956
ENSNVIP00000023804
annotation not available
   
 0.948
TMCO1
Transmembrane and coiled-coil domains 1.
   
 0.946
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
   0.845
RPL8
Ribosomal protein L8.
    
 
 0.830
RPL15
Ribosomal protein L15.
   
 
 0.828
WDR83OS
WD repeat domain 83 opposite strand.
    
 0.826
ENSNVIP00000005139
annotation not available
    
   0.826
RPL27
Ribosomal protein L27.
    
   0.826
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.