STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL6Tubulin tyrosine ligase like 6. (885 aa)    
Predicted Functional Partners:
CRMP1
Collapsin response mediator protein 1.
    
   0.663
DPYSL3
Dihydropyrimidinase like 3.
    
   0.631
ENSNVIP00000006211
Pleckstrin homology domain containing M3.
   
  
 0.558
CEP41
Centrosomal protein 41.
      
 0.549
TTLL5
Tubulin tyrosine ligase like 5.
      
 0.533
BTBD8
BTB domain containing 8.
      
 0.488
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.479
ENSNVIP00000007491
Sorting nexin 11.
      
 0.479
RFX4
Regulatory factor X4.
      
 0.479
CEP104
Centrosomal protein 104.
      
 0.476
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.