Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMBOX1Homeobox containing 1. (443 aa)    
Predicted Functional Partners:
RUNX1T1
RUNX1 partner transcriptional co-repressor 1.
   
 
 0.691
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.
      
 0.638
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
      
 0.619
FAM160B2
Family with sequence similarity 160 member B2.
      
 0.564
ENSNVIP00000028628
Meiosis specific with OB-fold.
      
 0.563
MAP3K4
Mitogen-activated protein kinase kinase kinase 4.
      
 0.560
NAT10
N-acetyltransferase 10.
      
 0.558
PRKCQ
Protein kinase C theta.
      
 0.545
RFC5
Replication factor C subunit 5.
      
 0.488
ATP11B
ATPase phospholipid transporting 11B (putative).
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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