STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3BRAB3B, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.975
ENSNVIP00000006151
annotation not available
   
 
 0.779
RIMS1
Regulating synaptic membrane exocytosis 1.
   
 0.773
SYTL4
Synaptotagmin like 4.
   
 0.750
DNAJC5B
DnaJ heat shock protein family (Hsp40) member C5 beta.
     
 0.730
SLC18A3
Solute carrier family 18 member A3.
     
 0.725
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.722
SYT1
Synaptotagmin 1.
   
 0.718
SYT2
Synaptotagmin 2.
   
 0.718
CHML
CHM like Rab escort protein.
    
 0.702
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.