Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRYZL1Crystallin zeta like 1. (323 aa)    
Predicted Functional Partners:
C12orf4
Chromosome 12 open reading frame 4.
   
   0.866
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
   0.851
ENSNVIP00000029678
Protein phosphatase 1 regulatory subunit 21.
    
   0.829
DOP1B
DOP1 leucine zipper like protein B.
      
 0.754
URB1
URB1 ribosome biogenesis homolog.
      
 0.753
PSMG1
Proteasome assembly chaperone 1.
      
 0.744
XYLB
Xylulokinase.
  
 
 0.736
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
  
   
 0.663
ENSNVIP00000023375
annotation not available
    
   0.652
ZRANB1
Zinc finger RANBP2-type containing 1.
   
   0.648
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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