STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN1Reticulon 1. (779 aa)    
Predicted Functional Partners:
SPAST
Spastin.
   
 
 0.776
MAPT
Microtubule associated protein tau.
   
  
 0.733
RTN4
Reticulon 4.
    
 
0.669
REEP2
Receptor accessory protein 2.
   
 
 0.666
BACE1
Beta-secretase 1.
   
 0.661
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.627
GCH1
GTP cyclohydrolase 1.
    
   0.625
TMEM33
Transmembrane protein 33.
   
 
 0.625
ENSNVIP00000027154
Vesicle trafficking 1.
    
   0.625
REEP1
Receptor accessory protein 1.
   
 
 0.624
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.