Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
USP42Ubiquitin specific peptidase 42. (1334 aa)    
Predicted Functional Partners:
SUDS3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.708
RCE1
Ras converting CAAX endopeptidase 1.
     
 0.662
TP53
Tumor protein p53.
    
  0.575
ENSNVIP00000000940
Transmembrane O-mannosyltransferase targeting cadherins 2.
   
  
 0.565
ENSNVIP00000008306
Interferon induced with helicase C domain 1.
     
 0.561
SNAI1
Snail family transcriptional repressor 1.
   
 
 0.544
CGAS
Cyclic GMP-AMP synthase.
      
 0.488
ENSNVIP00000022995
annotation not available
    
 0.453
ENSNVIP00000024469
Tripartite motif containing 21.
    
 
 0.452
ENSNVIP00000012666
annotation not available
    
  0.441
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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