FMNL3 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

FMNL3

Formin like 3. (1027 aa)

Predicted Functional Partners:

NPHP4

0.765

FMNL1

0.747

DAAM1

0.711

DAAM2

0.711

ARHGEF16

0.703

ENSNVIP00000003529

0.607

CDC42

0.607

ENSNVIP00000030096

0.607

ENSNVIP00000010206

0.605

FMN1

0.605

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGEF16	CDC42	ENSNVIP00000005214	ENSNVIP00000029236	Rho guanine nucleotide exchange factor 16.	Cell division cycle 42.	0.472
ARHGEF16	ENSNVIP00000003529	ENSNVIP00000005214	ENSNVIP00000003529	Rho guanine nucleotide exchange factor 16.	annotation not available	0.472
ARHGEF16	ENSNVIP00000030096	ENSNVIP00000005214	ENSNVIP00000030096	Rho guanine nucleotide exchange factor 16.	annotation not available	0.472
ARHGEF16	FMNL1	ENSNVIP00000005214	ENSNVIP00000029632	Rho guanine nucleotide exchange factor 16.	Formin like 1.	0.416
ARHGEF16	FMNL3	ENSNVIP00000005214	ENSNVIP00000007867	Rho guanine nucleotide exchange factor 16.	Formin like 3.	0.703
CDC42	ARHGEF16	ENSNVIP00000029236	ENSNVIP00000005214	Cell division cycle 42.	Rho guanine nucleotide exchange factor 16.	0.472
CDC42	DAAM1	ENSNVIP00000029236	ENSNVIP00000007525	Cell division cycle 42.	Dishevelled associated activator of morphogenesis 1.	0.560
CDC42	DAAM2	ENSNVIP00000029236	ENSNVIP00000017598	Cell division cycle 42.	Dishevelled associated activator of morphogenesis 2.	0.560
CDC42	ENSNVIP00000010206	ENSNVIP00000029236	ENSNVIP00000010206	Cell division cycle 42.	annotation not available	0.503
CDC42	FMN1	ENSNVIP00000029236	ENSNVIP00000019544	Cell division cycle 42.	Formin 1.	0.503
CDC42	FMNL1	ENSNVIP00000029236	ENSNVIP00000029632	Cell division cycle 42.	Formin like 1.	0.673
CDC42	FMNL3	ENSNVIP00000029236	ENSNVIP00000007867	Cell division cycle 42.	Formin like 3.	0.607
DAAM1	CDC42	ENSNVIP00000007525	ENSNVIP00000029236	Dishevelled associated activator of morphogenesis 1.	Cell division cycle 42.	0.560
DAAM1	ENSNVIP00000003529	ENSNVIP00000007525	ENSNVIP00000003529	Dishevelled associated activator of morphogenesis 1.	annotation not available	0.560
DAAM1	ENSNVIP00000010206	ENSNVIP00000007525	ENSNVIP00000010206	Dishevelled associated activator of morphogenesis 1.	annotation not available	0.678
DAAM1	ENSNVIP00000030096	ENSNVIP00000007525	ENSNVIP00000030096	Dishevelled associated activator of morphogenesis 1.	annotation not available	0.560
DAAM1	FMN1	ENSNVIP00000007525	ENSNVIP00000019544	Dishevelled associated activator of morphogenesis 1.	Formin 1.	0.678
DAAM1	FMNL1	ENSNVIP00000007525	ENSNVIP00000029632	Dishevelled associated activator of morphogenesis 1.	Formin like 1.	0.644
DAAM1	FMNL3	ENSNVIP00000007525	ENSNVIP00000007867	Dishevelled associated activator of morphogenesis 1.	Formin like 3.	0.711
DAAM2	CDC42	ENSNVIP00000017598	ENSNVIP00000029236	Dishevelled associated activator of morphogenesis 2.	Cell division cycle 42.	0.560