Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SREK1Splicing regulatory glutamic acid and lysine rich protein 1. (577 aa)    
Predicted Functional Partners:
RBM39
RNA binding motif protein 39.
   
 
 0.978
PNN
Pinin, desmosome associated protein.
   
 
 0.968
ENSNVIP00000016709
annotation not available
   
 0.967
SRSF11
Serine and arginine rich splicing factor 11.
   
   0.960
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.950
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.949
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.921
ENSNVIP00000016266
annotation not available
   
 0.920
ENSNVIP00000029923
annotation not available
   
 0.920
ZRANB2
Zinc finger RANBP2-type containing 2.
   
 0.916
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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