STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000007879TBC1 domain containing kinase. (893 aa)    
Predicted Functional Partners:
C12orf4
Chromosome 12 open reading frame 4.
    
 
 0.944
ENSNVIP00000023375
annotation not available
    
 
 0.880
ENSNVIP00000029678
Protein phosphatase 1 regulatory subunit 21.
   
 
 0.730
ENSNVIP00000030085
NME/NM23 nucleoside diphosphate kinase 6.
   
  
 0.583
ENSNVIP00000000033
annotation not available
      
 0.566
SH3BGRL3
SH3 domain binding glutamate rich protein like 3.
      
 0.559
POLR2E
RNA polymerase II subunit E.
      
 0.540
ENSNVIP00000028389
annotation not available
      
 0.499
ENSNVIP00000001827
MOB kinase activator 1A.
      
 0.496
PDAP1
PDGFA associated protein 1.
      
 0.496
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.