STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
REREArginine-glutamic acid dipeptide repeats. (1550 aa)    
Predicted Functional Partners:
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 
 0.880
NR2E1
Nuclear receptor subfamily 2 group E member 1.
    
 0.856
ENSNVIP00000023939
WD repeat domain 5.
    
 
 0.828
ENSNVIP00000018315
WD repeat domain 5B.
    
 
 0.824
ATN1
Atrophin 1.
   
 
 0.806
NR2E3
Nuclear receptor subfamily 2 group E member 3.
    
 0.800
FAT2
FAT atypical cadherin 2.
    
 0.737
FAT1
FAT atypical cadherin 1.
    
 0.737
HDAC2
Histone deacetylase 2.
    
 0.709
ENSNVIP00000009507
annotation not available
    
 0.709
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.