STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPVD1GTPase activating protein and VPS9 domains 1. (1404 aa)    
Predicted Functional Partners:
SPATA46
Spermatogenesis associated 46.
    
   0.868
YWHAB
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta.
    
 0.856
CSNK1A1
Casein kinase 1 alpha 1.
    
 
 0.849
ENSNVIP00000026960
annotation not available
    
 
 0.843
ENSNVIP00000029378
annotation not available
    
 
 0.843
AXIN1
Axin 1.
   
  0.831
ENSNVIP00000025152
RAB5A, member RAS oncogene family.
    
 0.803
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.795
ENSNVIP00000015569
annotation not available
    
 0.782
RAB17
RAB17, member RAS oncogene family.
    
 0.782
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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