STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAPVD1GTPase activating protein and VPS9 domains 1. (1404 aa)    
Predicted Functional Partners:
ENSNVIP00000025152
RAB5A, member RAS oncogene family.
    
 0.926
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.860
RAB5B
RAB5B, member RAS oncogene family.
    
 0.840
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
   
 0.816
ENSNVIP00000024647
TBC1 domain family member 8B.
   
 
 0.775
ENSNVIP00000015569
annotation not available
    
 0.770
RAB17
RAB17, member RAS oncogene family.
    
 0.770
RASA2
RAS p21 protein activator 2.
    
 
 0.767
UBAP1
Ubiquitin associated protein 1.
   
  
 0.763
RAB21
RAB21, member RAS oncogene family.
   
 0.750
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.