STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDAC2Histone deacetylase 2. (488 aa)    
Predicted Functional Partners:
ENSNVIP00000032025
annotation not available
   
 0.980
SIN3A
SIN3 transcription regulator family member A.
   
 0.970
SAP30
Sin3A associated protein 30.
    
 0.960
RCOR1
REST corepressor 1.
    
 0.959
RB1
RB transcriptional corepressor 1.
   
 0.955
HDAC3
Histone deacetylase 3.
   
 0.943
SAP30L
SAP30 like.
    
 0.942
MTA2
Metastasis associated 1 family member 2.
   
 0.938
SMAD4
SMAD family member 4.
   
 0.936
MTA1
Metastasis associated 1.
   
 0.936
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.