STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000008032Coagulation factor XIII A chain. (732 aa)    
Predicted Functional Partners:
F13B
Coagulation factor XIII B chain.
    
 0.996
F2
Coagulation factor II, thrombin.
    
 0.914
FGA
Fibrinogen alpha chain.
   
 0.835
HSPB1
Heat shock protein family B (small) member 1.
    
   0.737
ENSNVIP00000031937
annotation not available
    
   0.737
MRC1
Mannose receptor C-type 1.
   
 0.689
SERPIND1
Serpin family D member 1.
     
 0.637
LOXHD1
Lipoxygenase homology domains 1.
    
 
 0.612
ENSNVIP00000030788
annotation not available
    
 0.611
SERPINE2
Serpin family E member 2.
     
 0.603
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.