Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C19orf71Chromosome 19 open reading frame 71. (208 aa)    
Predicted Functional Partners:
RIBC2
RIB43A domain with coiled-coils 2.
   
   0.895
EFHC2
EF-hand domain containing 2.
   
 
 0.890
EFCAB6
EF-hand calcium binding domain 6.
   
 
 0.886
CFAP161
Cilia and flagella associated protein 161.
    
 
 0.877
TEKT5
Tektin 5.
   
 
 0.825
EFHC1
EF-hand domain containing 1.
   
 
 0.809
FAM166A
Family with sequence similarity 166 member A.
   
   0.806
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.789
C9orf116
Chromosome 9 open reading frame 116.
   
 
 0.786
ENSNVIP00000015558
Tektin 2.
   
 
 0.777
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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