Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BUD13BUD13 homolog. (629 aa)    
Predicted Functional Partners:
RBMX2
RNA binding motif protein X-linked 2.
   
 0.996
SNIP1
Smad nuclear interacting protein 1.
   
 0.993
GPKOW
G-patch domain and KOW motifs.
   
 
 0.977
DHX16
DEAH-box helicase 16.
   
 0.959
MFAP1
Microfibril associated protein 1.
   
 0.958
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.947
PRPF8
pre-mRNA processing factor 8.
    
 0.939
SF3B1
Splicing factor 3b subunit 1.
    
 0.937
SF3B2
Splicing factor 3b subunit 2.
    
 0.930
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.926
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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