STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT5tRNA methyltransferase 5. (498 aa)    
Predicted Functional Partners:
ENSNVIP00000015912
Riboflavin kinase.
     
 0.842
TRMT10B
tRNA methyltransferase 10B.
   
  
 0.814
FLAD1
Flavin adenine dinucleotide synthetase 1.
      
 0.766
ATP23
ATP23 metallopeptidase and ATP synthase assembly factor homolog.
      
 0.743
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
  
 0.679
ENSNVIP00000022840
annotation not available
   
 
 0.674
ENSNVIP00000000944
annotation not available
   
 
 0.673
ENSNVIP00000013035
annotation not available
   
 
 0.673
ENSNVIP00000025137
annotation not available
   
 
 0.673
TYW5
tRNA-yW synthesizing protein 5.
   
  
 0.666
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.