STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 member 6. (456 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.831
NOCT
Nocturnin.
   
    0.795
SLC35C2
Solute carrier family 35 member C2.
   
 
 0.651
SLC38A9
Solute carrier family 38 member 9.
      
 0.574
SLC41A2
Solute carrier family 41 member 2.
      
 0.544
LUC7L
LUC7 like.
      
 0.540
SLC52A3
Solute carrier family 52 member 3.
      
 0.538
SLC7A6
Solute carrier family 7 member 6.
      
 0.509
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.508
SLC31A2
Solute carrier family 31 member 2.
   
  
 0.489
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.