Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB23RAB23, member RAS oncogene family. (173 aa)    
Predicted Functional Partners:
INTU
Inturned planar cell polarity protein.
    
 
 0.879
CPLANE2
Ciliogenesis and planar polarity effector 2.
    
 0.781
ARL3
ADP ribosylation factor like GTPase 3.
    
 0.775
ARL13B
ADP ribosylation factor like GTPase 13B.
      
 0.753
PLPPR1
Phospholipid phosphatase related 1.
    
   0.668
GLI3
GLI family zinc finger 3.
    
 0.662
IFT22
Intraflagellar transport 22.
      
 0.642
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
     
 0.579
RABGGTB
Rab geranylgeranyltransferase subunit beta.
     
  0.566
ARL2
ADP ribosylation factor like GTPase 2.
      
 0.535
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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