STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)    
Predicted Functional Partners:
SF3A3
Splicing factor 3a subunit 3.
   
 0.998
ENSNVIP00000000520
PHD finger protein 5A.
   
 0.996
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.994
RBM17
RNA binding motif protein 17.
   
 0.994
DHX15
DEAH-box helicase 15.
   
 0.994
SF3A1
Splicing factor 3a subunit 1.
   
 0.993
SF3A2
Splicing factor 3a subunit 2.
    
 0.993
SF3B3
Splicing factor 3b subunit 3.
    
 0.993
SF3B1
Splicing factor 3b subunit 1.
   
 0.992
ENSNVIP00000027742
Splicing factor 3b subunit 5.
   
 0.992
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.