Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NGFRNerve growth factor receptor. (333 aa)    
Predicted Functional Partners:
NGF
Nerve growth factor.
    
 0.997
SORT1
Sortilin 1.
    
 0.992
ENSNVIP00000013359
TNF receptor associated factor 6.
    
 0.990
LINGO1
Leucine rich repeat and Ig domain containing 1.
    
 0.980
RIPK2
Receptor interacting serine/threonine kinase 2.
    
 0.979
MAGED1
MAGE family member D1.
    
 0.973
NTF3
Neurotrophin 3.
    
 0.973
ARHGDIA
Rho GDP dissociation inhibitor alpha.
    
 0.970
ARHGDIB
Rho GDP dissociation inhibitor beta.
    
 0.970
ARHGDIG
Rho GDP dissociation inhibitor gamma.
    
 0.961
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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