STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000008308annotation not available (263 aa)    
Predicted Functional Partners:
ZCCHC8
Zinc finger CCHC-type containing 8.
    
 
 0.958
SRRT
Serrate, RNA effector molecule.
    
 0.896
RBM39
RNA binding motif protein 39.
    
 0.858
ENSNVIP00000012262
Mtr4 exosome RNA helicase.
    
 0.853
DHX9
DExH-box helicase 9.
    
 0.841
SRRM2
Serine/arginine repetitive matrix 2.
     
 0.832
SF1
Splicing factor 1.
    
  0.831
HTATSF1
HIV-1 Tat specific factor 1.
    
  0.825
PRPF40A
pre-mRNA processing factor 40 homolog A.
    
  0.818
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
    
  0.813
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.