STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SELENOSSelenoprotein S. (188 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
   
 0.987
VCP
Valosin containing protein.
    
 0.985
SYVN1
Synoviolin 1.
   
 0.914
DERL2
Derlin 2.
   
 0.914
AMFR
Autocrine motility factor receptor.
   
 0.910
DERL3
Derlin 3.
   
 0.901
KLHDC2
Kelch domain containing 2.
    
 
 0.887
ENSNVIP00000029432
Selenoprotein K.
   
 
 0.857
FAF2
Fas associated factor family member 2.
   
 
 0.837
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.752
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.