Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUGGCNuclear GTPase, germinal center associated. (765 aa)    
Predicted Functional Partners:
EPHX2
Epoxide hydrolase 2.
  
 
 0.633
RFTN2
Raftlin family member 2.
      
 0.561
RHEX
Regulator of hemoglobinization and erythroid cell expansion.
      
 0.559
EFR3B
EFR3 homolog B.
      
 0.557
ENSNVIP00000020414
Glyoxylate and hydroxypyruvate reductase.
  
 0.555
GCLC
Glutamate-cysteine ligase catalytic subunit.
    
 0.551
ENSNVIP00000013239
Janus kinase and microtubule interacting protein 2.
      
 0.488
MMADHC
Metabolism of cobalamin associated D.
    
 0.469
ENSNVIP00000023897
3-oxoacyl-ACP synthase, mitochondrial.
     
 0.458
TKFC
Triokinase and FMN cyclase.
   
 
 0.450
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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