STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC186Coiled-coil domain containing 186. (905 aa)    
Predicted Functional Partners:
ENSNVIP00000009318
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.770
ARFIP2
ADP ribosylation factor interacting protein 2.
      
 0.754
CASC4
Cancer susceptibility 4.
      
 0.754
CCDC138
Coiled-coil domain containing 138.
      
 0.753
TMEM87A
Transmembrane protein 87A.
   
  
 0.752
VPS54
VPS54 subunit of GARP complex.
     
 0.749
ENSNVIP00000022862
annotation not available
      
 0.744
CEP350
Centrosomal protein 350.
   
    0.743
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.708
RAB30
RAB30, member RAS oncogene family.
    
 
 0.674
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.