STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC186Coiled-coil domain containing 186. (905 aa)    
Predicted Functional Partners:
CCDC138
Coiled-coil domain containing 138.
      
 0.812
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.792
VPS54
VPS54 subunit of GARP complex.
     
 0.790
VPS52
VPS52 subunit of GARP complex.
     
 0.780
RABL6
RAB, member RAS oncogene family like 6.
    
 
 0.766
CPD
Carboxypeptidase D.
      
 0.763
CCDC22
Coiled-coil domain containing 22.
      
 0.736
CEP350
Centrosomal protein 350.
   
    0.736
TMF1
TATA element modulatory factor 1.
   
 
 0.713
ENSNVIP00000023028
VPS50 subunit of EARP/GARPII complex.
      
 0.701
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.