Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRPHPeripherin. (469 aa)    
Predicted Functional Partners:
ENSNVIP00000025295
annotation not available
   
  0.921
INA
Internexin neuronal intermediate filament protein alpha.
   
  0.912
ENSNVIP00000027176
annotation not available
    
   0.861
NEFM
Neurofilament medium.
   
  0.819
NEFH
Neurofilament heavy.
   
  0.808
VIM
Vimentin.
   
   0.789
DES
Desmin.
   
   0.789
TRDN
Triadin.
   
  0.567
ENSNVIP00000005736
poly(ADP-ribose) polymerase family member 11.
      
 0.488
SYNC
Syncoilin, intermediate filament protein.
   
  0.461
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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