STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COLEC10Collectin subfamily member 10. (277 aa)    
Predicted Functional Partners:
COLEC11
Collectin subfamily member 11.
   
 0.967
ENSNVIP00000026403
Mannan binding lectin serine peptidase 1.
    
 0.795
MASP2
Mannan binding lectin serine peptidase 2.
    
 0.786
ENSNVIP00000003807
annotation not available
     
 0.744
C1S
Complement C1s.
    
 0.673
C1R
Complement C1r.
    
 0.672
HOXB2
Homeobox B2.
    
 
 0.660
C1RL
Complement C1r subcomponent like.
    
 0.607
GJB1
Gap junction protein beta 1.
      
 0.581
SFTPD
Surfactant protein D.
   
 
 0.550
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.