STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGAChromogranin A. (446 aa)    
Predicted Functional Partners:
CHGB
Chromogranin B.
   
 
 0.994
PLEKHB1
Pleckstrin homology domain containing B1.
   
    0.993
SCG2
Secretogranin II.
   
 
 0.825
SCG3
Secretogranin III.
   
  
 0.770
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
      
 0.753
OLFM4
Olfactomedin 4.
      
 0.743
ENSNVIP00000026437
Somatostatin.
   
  
 0.725
TPH1
Tryptophan hydroxylase 1.
   
  
 0.716
GHRL
Ghrelin and obestatin prepropeptide.
      
 0.710
ENSNVIP00000032020
CD79a molecule.
      
 0.708
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.