GOLGA5 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GOLGA5

Golgin A5. (731 aa)

Predicted Functional Partners:

ENSNVIP00000018438

0.754

ENSNVIP00000021876

0.715

ENSNVIP00000023617

0.715

ENSNVIP00000003933

0.696

ENSNVIP00000018961

0.696

GOLGB1

0.691

NCKAP1

0.676

ENSNVIP00000024291

0.661

CEP170

0.650

GDI2

0.641

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CEP170	ENSNVIP00000024291	ENSNVIP00000002961	ENSNVIP00000024291	Centrosomal protein 170.	Centrin 3.	0.668
CEP170	GOLGA5	ENSNVIP00000002961	ENSNVIP00000008463	Centrosomal protein 170.	Golgin A5.	0.650
ENSNVIP00000003933	ENSNVIP00000021876	ENSNVIP00000003933	ENSNVIP00000021876	annotation not available	annotation not available	0.779
ENSNVIP00000003933	ENSNVIP00000023617	ENSNVIP00000003933	ENSNVIP00000023617	annotation not available	annotation not available	0.739
ENSNVIP00000003933	GDI2	ENSNVIP00000003933	ENSNVIP00000012277	annotation not available	GDP dissociation inhibitor 2.	0.850
ENSNVIP00000003933	GOLGA5	ENSNVIP00000003933	ENSNVIP00000008463	annotation not available	Golgin A5.	0.696
ENSNVIP00000018438	GDI2	ENSNVIP00000018438	ENSNVIP00000012277	Coiled-coil domain containing 91.	GDP dissociation inhibitor 2.	0.658
ENSNVIP00000018438	GOLGA5	ENSNVIP00000018438	ENSNVIP00000008463	Coiled-coil domain containing 91.	Golgin A5.	0.754
ENSNVIP00000018438	NCKAP1	ENSNVIP00000018438	ENSNVIP00000010150	Coiled-coil domain containing 91.	NCK associated protein 1.	0.669
ENSNVIP00000018961	ENSNVIP00000021876	ENSNVIP00000018961	ENSNVIP00000021876	RAB1B, member RAS oncogene family.	annotation not available	0.779
ENSNVIP00000018961	ENSNVIP00000023617	ENSNVIP00000018961	ENSNVIP00000023617	RAB1B, member RAS oncogene family.	annotation not available	0.739
ENSNVIP00000018961	GDI2	ENSNVIP00000018961	ENSNVIP00000012277	RAB1B, member RAS oncogene family.	GDP dissociation inhibitor 2.	0.850
ENSNVIP00000018961	GOLGA5	ENSNVIP00000018961	ENSNVIP00000008463	RAB1B, member RAS oncogene family.	Golgin A5.	0.696
ENSNVIP00000021876	ENSNVIP00000003933	ENSNVIP00000021876	ENSNVIP00000003933	annotation not available	annotation not available	0.779
ENSNVIP00000021876	ENSNVIP00000018961	ENSNVIP00000021876	ENSNVIP00000018961	annotation not available	RAB1B, member RAS oncogene family.	0.779
ENSNVIP00000021876	ENSNVIP00000023617	ENSNVIP00000021876	ENSNVIP00000023617	annotation not available	annotation not available	0.809
ENSNVIP00000021876	GOLGA5	ENSNVIP00000021876	ENSNVIP00000008463	annotation not available	Golgin A5.	0.715
ENSNVIP00000023617	ENSNVIP00000003933	ENSNVIP00000023617	ENSNVIP00000003933	annotation not available	annotation not available	0.739
ENSNVIP00000023617	ENSNVIP00000018961	ENSNVIP00000023617	ENSNVIP00000018961	annotation not available	RAB1B, member RAS oncogene family.	0.739
ENSNVIP00000023617	ENSNVIP00000021876	ENSNVIP00000023617	ENSNVIP00000021876	annotation not available	annotation not available	0.809