STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000008488Exoribonuclease 1. (349 aa)    
Predicted Functional Partners:
ENSNVIP00000018977
annotation not available
    
 
 0.854
SLBP
Stem-loop binding protein.
    
 
 0.854
NUDCD1
NudC domain containing 1.
    
   0.829
DICER1
Dicer 1, ribonuclease III.
    
 
 0.789
ANO9
Anoctamin 9.
      
 0.745
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.732
ENSNVIP00000027998
annotation not available
   
  
 0.732
SEPSECS
Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase.
    
 
 0.719
EXOSC5
Exosome component 5.
    
 0.714
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
      
 0.712
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.