STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5APDS5 cohesin associated factor A. (1337 aa)    
Predicted Functional Partners:
PDS5B
PDS5 cohesin associated factor B.
   
 0.997
SMC3
Structural maintenance of chromosomes 3.
   
 0.995
WAPL
WAPL cohesin release factor.
   
 0.995
STAG2
Stromal antigen 2.
   
 0.992
NIPBL
NIPBL cohesin loading factor.
   
 0.990
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.990
STAG1
Stromal antigen 1.
   
 0.985
RAD21
RAD21 cohesin complex component.
   
 0.964
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.964
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.962
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.