Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000008509Limb development membrane protein 1 like. (489 aa)    
Predicted Functional Partners:
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.708
LCN1
Lipocalin 1.
    
 
 0.691
SH2D3C
SH2 domain containing 3C.
      
 0.681
KCNK10
Potassium two pore domain channel subfamily K member 10.
      
 0.640
ENSNVIP00000031095
Lumican.
      
 0.612
YPEL3
Yippee like 3.
      
 0.610
ENSNVIP00000021994
Calcium and integrin binding 1.
      
 0.593
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
    
 
 0.590
RHEBL1
RHEB like 1.
    
 
 0.560
CDC42BPG
CDC42 binding protein kinase gamma.
      
 0.553
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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