STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000009273Thioredoxin like 4B. (149 aa)    
Predicted Functional Partners:
ENSNVIP00000024252
pre-mRNA processing factor 6.
    
 0.971
ENSNVIP00000029497
Elongation factor Tu GTP binding domain containing 2.
    
 0.970
ENSNVIP00000027125
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.966
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.957
PRPF8
pre-mRNA processing factor 8.
    
 0.953
PRPF31
pre-mRNA processing factor 31.
    
 0.921
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.921
ZMAT2
Zinc finger matrin-type 2.
    
 0.912
ENSNVIP00000031405
Small nuclear ribonucleoprotein U5 subunit 40.
    
 0.910
PQBP1
Polyglutamine binding protein 1.
   
 0.904
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.