Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASP10 | CASP3 | ENSNVIP00000010908 | ENSNVIP00000006351 | Caspase 10. | Caspase 3. | 0.961 |
CASP10 | CASP7 | ENSNVIP00000010908 | ENSNVIP00000008729 | Caspase 10. | Caspase 7. | 0.932 |
CASP10 | CASP8 | ENSNVIP00000010908 | ENSNVIP00000010827 | Caspase 10. | Caspase 8. | 0.971 |
CASP10 | CFLAR | ENSNVIP00000010908 | ENSNVIP00000010973 | Caspase 10. | CASP8 and FADD like apoptosis regulator. | 0.978 |
CASP10 | ENSNVIP00000013503 | ENSNVIP00000010908 | ENSNVIP00000013503 | Caspase 10. | TNFRSF1A associated via death domain. | 0.966 |
CASP10 | ENSNVIP00000016365 | ENSNVIP00000010908 | ENSNVIP00000016365 | Caspase 10. | annotation not available | 0.885 |
CASP10 | ENSNVIP00000029921 | ENSNVIP00000010908 | ENSNVIP00000029921 | Caspase 10. | annotation not available | 0.885 |
CASP10 | FADD | ENSNVIP00000010908 | ENSNVIP00000014543 | Caspase 10. | Fas associated via death domain. | 0.992 |
CASP10 | FAS | ENSNVIP00000010908 | ENSNVIP00000031691 | Caspase 10. | Fas cell surface death receptor. | 0.898 |
CASP10 | RIPK1 | ENSNVIP00000010908 | ENSNVIP00000014752 | Caspase 10. | Receptor interacting serine/threonine kinase 1. | 0.925 |
CASP3 | CASP10 | ENSNVIP00000006351 | ENSNVIP00000010908 | Caspase 3. | Caspase 10. | 0.961 |
CASP3 | CASP7 | ENSNVIP00000006351 | ENSNVIP00000008729 | Caspase 3. | Caspase 7. | 0.945 |
CASP3 | CASP8 | ENSNVIP00000006351 | ENSNVIP00000010827 | Caspase 3. | Caspase 8. | 0.989 |
CASP3 | ENSNVIP00000013503 | ENSNVIP00000006351 | ENSNVIP00000013503 | Caspase 3. | TNFRSF1A associated via death domain. | 0.738 |
CASP3 | ENSNVIP00000016365 | ENSNVIP00000006351 | ENSNVIP00000016365 | Caspase 3. | annotation not available | 0.640 |
CASP3 | ENSNVIP00000029921 | ENSNVIP00000006351 | ENSNVIP00000029921 | Caspase 3. | annotation not available | 0.640 |
CASP3 | FADD | ENSNVIP00000006351 | ENSNVIP00000014543 | Caspase 3. | Fas associated via death domain. | 0.858 |
CASP3 | FAS | ENSNVIP00000006351 | ENSNVIP00000031691 | Caspase 3. | Fas cell surface death receptor. | 0.775 |
CASP3 | RIPK1 | ENSNVIP00000006351 | ENSNVIP00000014752 | Caspase 3. | Receptor interacting serine/threonine kinase 1. | 0.787 |
CASP7 | CASP10 | ENSNVIP00000008729 | ENSNVIP00000010908 | Caspase 7. | Caspase 10. | 0.932 |
page 1 of 5