STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000011296annotation not available (307 aa)    
Predicted Functional Partners:
CLK4
CDC like kinase 4.
  
 
 
0.959
RABGGTB
Rab geranylgeranyltransferase subunit beta.
   
    0.736
SF3B1
Splicing factor 3b subunit 1.
   
 
 0.705
PRPF39
pre-mRNA processing factor 39.
   
    0.693
RBM39
RNA binding motif protein 39.
   
 
 0.583
SON
SON DNA binding protein.
    
 
 0.571
BTBD6
BTB domain containing 6.
      
 0.515
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
      
 0.476
TTC14
Tetratricopeptide repeat domain 14.
   
   0.476
PPP6R1
Protein phosphatase 6 regulatory subunit 1.
   
  
 0.474
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.