STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATS1Spermatogenesis associated serine rich 1. (297 aa)    
Predicted Functional Partners:
ENSNVIP00000030719
annotation not available
      
 0.742
ENSNVIP00000028338
annotation not available
      
 0.741
KAT6B
Lysine acetyltransferase 6B.
      
 0.731
ENSNVIP00000024228
annotation not available
      
 0.656
HPS5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
      
 0.623
ENSNVIP00000003333
annotation not available
      
 0.614
ENSNVIP00000022995
annotation not available
      
 0.562
SPACA4
Sperm acrosome associated 4.
      
 0.538
CAPN11
Calpain 11.
      
 0.528
PDCL2
Phosducin like 2.
      
 0.519
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.