STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMOC1SPARC related modular calcium binding 1. (435 aa)    
Predicted Functional Partners:
CABP7
Calcium binding protein 7.
      
 0.757
ENSNVIP00000019602
annotation not available
      
 0.728
JADE1
Jade family PHD finger 1.
      
 0.664
SLC38A4
Solute carrier family 38 member 4.
      
 0.601
ABCB6
ATP binding cassette subfamily B member 6 (Langereis blood group).
      
 0.526
SALL2
Spalt like transcription factor 2.
      
 0.520
TSSC4
Tumor suppressing subtransferable candidate 4.
      
 0.518
GDF6
Growth differentiation factor 6.
      
 0.516
INSL6
Insulin like 6.
      
 0.505
GATM
Glycine amidinotransferase.
      
 0.481
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.