Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDX42 | GPN2 | ENSNVIP00000030649 | ENSNVIP00000030790 | DEAD-box helicase 42. | GPN-loop GTPase 2. | 0.429 |
DDX42 | TMEM35B | ENSNVIP00000030649 | ENSNVIP00000014776 | DEAD-box helicase 42. | Transmembrane protein 35B. | 0.523 |
GPN2 | DDX42 | ENSNVIP00000030790 | ENSNVIP00000030649 | GPN-loop GTPase 2. | DEAD-box helicase 42. | 0.429 |
GPN2 | TMEM35B | ENSNVIP00000030790 | ENSNVIP00000014776 | GPN-loop GTPase 2. | Transmembrane protein 35B. | 0.581 |
PICK1 | TMEM35B | ENSNVIP00000002601 | ENSNVIP00000014776 | Protein interacting with PRKCA 1. | Transmembrane protein 35B. | 0.588 |
TMEM35B | DDX42 | ENSNVIP00000014776 | ENSNVIP00000030649 | Transmembrane protein 35B. | DEAD-box helicase 42. | 0.523 |
TMEM35B | GPN2 | ENSNVIP00000014776 | ENSNVIP00000030790 | Transmembrane protein 35B. | GPN-loop GTPase 2. | 0.581 |
TMEM35B | PICK1 | ENSNVIP00000014776 | ENSNVIP00000002601 | Transmembrane protein 35B. | Protein interacting with PRKCA 1. | 0.588 |
TMEM35B | UROS | ENSNVIP00000014776 | ENSNVIP00000010866 | Transmembrane protein 35B. | Uroporphyrinogen III synthase. | 0.514 |
UROS | TMEM35B | ENSNVIP00000010866 | ENSNVIP00000014776 | Uroporphyrinogen III synthase. | Transmembrane protein 35B. | 0.514 |