Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTC1 | PAXX | ENSNVIP00000006365 | ENSNVIP00000015701 | CST telomere replication complex component 1. | PAXX non-homologous end joining factor. | 0.691 |
CTC1 | SHLD2 | ENSNVIP00000006365 | ENSNVIP00000031874 | CST telomere replication complex component 1. | Shieldin complex subunit 2. | 0.621 |
CYREN | ENSNVIP00000023376 | ENSNVIP00000029376 | ENSNVIP00000023376 | Cell cycle regulator of NHEJ. | annotation not available | 0.444 |
CYREN | PAXX | ENSNVIP00000029376 | ENSNVIP00000015701 | Cell cycle regulator of NHEJ. | PAXX non-homologous end joining factor. | 0.613 |
ENSNVIP00000006795 | ENSNVIP00000023376 | ENSNVIP00000006795 | ENSNVIP00000023376 | X-ray repair cross complementing 5. | annotation not available | 0.886 |
ENSNVIP00000006795 | ENSNVIP00000029461 | ENSNVIP00000006795 | ENSNVIP00000029461 | X-ray repair cross complementing 5. | Non-homologous end joining factor 1. | 0.902 |
ENSNVIP00000006795 | LIG4 | ENSNVIP00000006795 | ENSNVIP00000003482 | X-ray repair cross complementing 5. | DNA ligase 4. | 0.991 |
ENSNVIP00000006795 | PAXX | ENSNVIP00000006795 | ENSNVIP00000015701 | X-ray repair cross complementing 5. | PAXX non-homologous end joining factor. | 0.507 |
ENSNVIP00000006795 | PRKDC | ENSNVIP00000006795 | ENSNVIP00000029733 | X-ray repair cross complementing 5. | Protein kinase, DNA-activated, catalytic subunit. | 0.992 |
ENSNVIP00000006795 | XRCC6 | ENSNVIP00000006795 | ENSNVIP00000000325 | X-ray repair cross complementing 5. | X-ray repair cross complementing 6. | 0.999 |
ENSNVIP00000023376 | CYREN | ENSNVIP00000023376 | ENSNVIP00000029376 | annotation not available | Cell cycle regulator of NHEJ. | 0.444 |
ENSNVIP00000023376 | ENSNVIP00000006795 | ENSNVIP00000023376 | ENSNVIP00000006795 | annotation not available | X-ray repair cross complementing 5. | 0.886 |
ENSNVIP00000023376 | LIG4 | ENSNVIP00000023376 | ENSNVIP00000003482 | annotation not available | DNA ligase 4. | 0.761 |
ENSNVIP00000023376 | PAXX | ENSNVIP00000023376 | ENSNVIP00000015701 | annotation not available | PAXX non-homologous end joining factor. | 0.479 |
ENSNVIP00000023376 | SAE1 | ENSNVIP00000023376 | ENSNVIP00000013750 | annotation not available | SUMO1 activating enzyme subunit 1. | 0.431 |
ENSNVIP00000023376 | XRCC6 | ENSNVIP00000023376 | ENSNVIP00000000325 | annotation not available | X-ray repair cross complementing 6. | 0.837 |
ENSNVIP00000029461 | ENSNVIP00000006795 | ENSNVIP00000029461 | ENSNVIP00000006795 | Non-homologous end joining factor 1. | X-ray repair cross complementing 5. | 0.902 |
ENSNVIP00000029461 | LIG4 | ENSNVIP00000029461 | ENSNVIP00000003482 | Non-homologous end joining factor 1. | DNA ligase 4. | 0.919 |
ENSNVIP00000029461 | PAXX | ENSNVIP00000029461 | ENSNVIP00000015701 | Non-homologous end joining factor 1. | PAXX non-homologous end joining factor. | 0.626 |
ENSNVIP00000029461 | PRKDC | ENSNVIP00000029461 | ENSNVIP00000029733 | Non-homologous end joining factor 1. | Protein kinase, DNA-activated, catalytic subunit. | 0.566 |
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