STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000016911annotation not available (594 aa)    
Predicted Functional Partners:
PRPF38A
pre-mRNA processing factor 38A.
   
  
 0.752
TTC8
Tetratricopeptide repeat domain 8.
   
  
 0.729
CEP170B
Centrosomal protein 170B.
      
 0.712
TULP1
TUB like protein 1.
      
 0.656
ENSNVIP00000018539
annotation not available
   
 
 0.655
ENSNVIP00000018336
annotation not available
   
 
 0.650
NEK4
NIMA related kinase 4.
   
 
 0.637
ENSNVIP00000011860
Retinol dehydrogenase 12.
      
 0.635
STK38L
Serine/threonine kinase 38 like.
      
 0.622
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.622
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.