STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO6Transmembrane and coiled-coil domains 6. (509 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.760
ENSNVIP00000010642
Chromosome segregation 1 like.
   
 0.701
NUP153
Nucleoporin 153.
   
 
 0.608
NCBP1
Nuclear cap binding protein subunit 1.
   
 
 0.603
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
   
 
 0.552
RRP8
Ribosomal RNA processing 8.
    
   0.550
EXOSC10
Exosome component 10.
    
   0.550
NUP50
Nucleoporin 50.
   
 
 0.515
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.488
RANBP2
RAN binding protein 2.
   
 
 0.485
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.