STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABS1Calcium binding protein, spermatid associated 1. (395 aa)    
Predicted Functional Partners:
ENSNVIP00000028282
annotation not available
   
  
 0.658
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
      
 0.622
TTC21A
Tetratricopeptide repeat domain 21A.
      
 0.613
SHCBP1L
SHC binding and spindle associated 1 like.
      
 0.613
TRAPPC1
Trafficking protein particle complex 1.
    
   0.609
HEATR9
HEAT repeat containing 9.
  
   
 0.595
MAP11
Microtubule associated protein 11.
    
   0.590
TRAPPC2L
Trafficking protein particle complex 2 like.
    
   0.586
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.562
ENSNVIP00000016826
annotation not available
      
 0.556
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.