STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit. (423 aa)    
Predicted Functional Partners:
ENSNVIP00000002960
annotation not available
   
 0.976
ENSNVIP00000016921
annotation not available
    
 0.941
ENSNVIP00000030286
annotation not available
    
 0.941
RPF1
Ribosome production factor 1 homolog.
   
  
 0.854
TRMT61B
tRNA methyltransferase 61B.
   
 
 0.785
ENSNVIP00000024219
tRNA methyltransferase 6.
   
  
 0.729
METTL1
Methyltransferase like 1.
   
 
 0.714
TRMT61A
tRNA methyltransferase 61A.
   
 
 0.693
MRPL47
Mitochondrial ribosomal protein L47.
   
    0.682
TRMT5
tRNA methyltransferase 5.
   
  
 0.679
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.