STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis associated 17. (362 aa)    
Predicted Functional Partners:
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.765
ENSNVIP00000024203
G-patch domain containing 2.
      
 0.765
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.765
ENSNVIP00000028571
annotation not available
     
 0.744
ENSNVIP00000028977
annotation not available
     
 0.740
MGAT1
Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase.
      
 0.737
ENSNVIP00000004403
annotation not available
   
 
 0.704
COL23A1
Collagen type XXIII alpha 1 chain.
    
 
 0.677
MATN2
Matrilin 2.
   
 
 0.653
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5.
     
 0.624
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.