STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC154Coiled-coil domain containing 154. (519 aa)    
Predicted Functional Partners:
ENSNVIP00000015952
Coiled-coil domain containing 106.
      
 0.793
LIMK2
LIM domain kinase 2.
   
 0.774
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
      
 0.766
LIMK1
LIM domain kinase 1.
   
 0.723
CCDC15
Coiled-coil domain containing 15.
      
 0.700
ATG7
Autophagy related 7.
   
 
 0.417
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.