STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000027143Retinal outer segment membrane protein 1. (351 aa)    
Predicted Functional Partners:
PRPH2
Peripherin 2.
  
 
0.875
ENSNVIP00000027543
annotation not available
   
  
 0.775
GNAT1
G protein subunit alpha transducin 1.
   
  
 0.760
GNAT2
G protein subunit alpha transducin 2.
   
  
 0.759
GNGT1
G protein subunit gamma transducin 1.
   
  
 0.758
CCDC25
Coiled-coil domain containing 25.
      
 0.742
RHO
Rhodopsin.
   
  
 0.730
PDE6G
Phosphodiesterase 6G.
   
  
 0.644
OPN1SW
Opsin 1, short wave sensitive.
   
  
 0.636
RCVRN
Recoverin.
   
  
 0.631
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.