STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH8alkB homolog 8, tRNA methyltransferase. (668 aa)    
Predicted Functional Partners:
ENSNVIP00000021993
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.883
BAALC
BAALC binder of MAP3K1 and KLF4.
      
 0.759
ALKBH4
alkB homolog 4, lysine demethylase.
   
  
 0.698
ENSNVIP00000029884
annotation not available
      
 0.695
RAB39A
RAB39A, member RAS oncogene family.
      
 0.654
MIER1
MIER1 transcriptional regulator.
      
 0.623
ANGEL2
Angel homolog 2.
      
 0.622
ALKBH7
alkB homolog 7.
      
 0.604
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.556
ELP2
Elongator acetyltransferase complex subunit 2.
      
 0.543
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.