Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KSE_08080Hypothetical protein. (196 aa)    
Predicted Functional Partners:
KSE_35420
Putative iron-siderophore ABC transporter substrate-binding protein.
  
     0.689
KSE_01270
Hypothetical protein; Similar to Putative molybdate metabolism regulator in Escherichia coli (P33345).
  
     0.615
KSE_08090
Putative lysozyme precursor; Protein synonym:N,O-diacetylmuramidase.
     
 0.610
KSE_65750
Hypothetical protein; Similar to Putative molybdate metabolism regulator in Escherichia coli (P33345).
  
     0.594
BAJ25935.1
Putative regulatory protein.
  
     0.590
BAJ33343.1
Putative regulatory protein.
  
     0.590
KSE_09300
Hypothetical protein.
  
     0.580
KSE_73810
Hypothetical protein.
  
     0.577
KSE_09330
Hypothetical protein.
  
     0.575
KSE_08540
Hypothetical protein.
  
     0.493
Your Current Organism:
Kitasatospora setae
NCBI taxonomy Id: 452652
Other names: K. setae KM-6054, Kitasatospora setae KM-6054, Kitasatospora setae str. KM-6054, Kitasatospora setae strain KM-6054
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